3D structure

PDB id
7RYH (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-TP-6076 complex: Empty 70S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.43 Å

Loop

Sequence
UUUA*UUUG*CU*AGUA*UCUUAGUGAUCC*GCUCAACGGAUAAAA
Length
41 nucleotides
Bulged bases
7RYH|1|A|U|2072, 7RYH|1|A|A|2384, 7RYH|1|A|U|2386, 7RYH|1|A|G|2424, 7RYH|1|A|A|2426
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7RYH|1|A|U|2070
7RYH|1|A|U|2071
7RYH|1|A|U|2072
7RYH|1|A|A|2073
*
7RYH|1|A|U|2239
7RYH|1|A|U|2240
7RYH|1|A|U|2241
7RYH|1|A|G|2242
*
7RYH|1|A|C|2254
7RYH|1|A|U|2255
*
7RYH|1|A|A|2277
7RYH|1|A|G|2278
7RYH|1|A|U|2279
7RYH|1|A|A|2280
*
7RYH|1|A|U|2380
7RYH|1|A|C|2381
7RYH|1|A|U|2382
7RYH|1|A|U|2383
7RYH|1|A|A|2384
7RYH|1|A|G|2385
7RYH|1|A|U|2386
7RYH|1|A|G|2387
7RYH|1|A|A|2388
7RYH|1|A|U|2389
7RYH|1|A|C|2390
7RYH|1|A|C|2391
*
7RYH|1|A|G|2417
7RYH|1|A|C|2418
7RYH|1|A|U|2419
7RYH|1|A|C|2420
7RYH|1|A|A|2421
7RYH|1|A|A|2422
7RYH|1|A|C|2423
7RYH|1|A|G|2424
7RYH|1|A|G|2425
7RYH|1|A|A|2426
7RYH|1|A|U|2427
7RYH|1|A|A|2428
7RYH|1|A|A|2429
7RYH|1|A|A|2430
7RYH|1|A|A|2431

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 0
50S ribosomal protein L33
Chain 2
50S ribosomal protein L35
Chain C
50S ribosomal protein L2
Chain K
50S ribosomal protein L15
Chain V
50S ribosomal protein L27
Chain W
50S ribosomal protein L28

Coloring options:

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