J6_7S1G_001

3D structure

PDB id

7S1G (explore in PDB, NAKB, or RNA 3D Hub)

Description

wild-type Escherichia coli stalled ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7S1G|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S1G|1|I|G|45
7S1G|1|I|G|46
*
7S1G|1|I|C|179
7S1G|1|I|G|180
7S1G|1|I|A|181
7S1G|1|I|A|182
7S1G|1|I|C|183
*
7S1G|1|I|G|214
7S1G|1|I|G|215
7S1G|1|I|A|216
7S1G|1|I|A|217
7S1G|1|I|A|218
7S1G|1|I|A|219
7S1G|1|I|G|220
7S1G|1|I|A|221
7S1G|1|I|A|222
7S1G|1|I|A|223
7S1G|1|I|U|224
*
7S1G|1|I|A|231
7S1G|1|I|G|232
7S1G|1|I|A|233
7S1G|1|I|U|234
7S1G|1|I|U|235
*
7S1G|1|I|A|262
7S1G|1|I|G|263
7S1G|1|I|C|264
7S1G|1|I|A|265
7S1G|1|I|G|266
*
7S1G|1|I|C|426
7S1G|1|I|U|427
7S1G|1|I|A|428
7S1G|1|I|A|429
7S1G|1|I|A|430
7S1G|1|I|U|431
7S1G|1|I|A|432
7S1G|1|I|C|433

Current chains

Chain I

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L34