J6_7S1I_001

3D structure

PDB id

7S1I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli stalled ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7S1I|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S1I|1|I|G|45
7S1I|1|I|G|46
*
7S1I|1|I|C|179
7S1I|1|I|G|180
7S1I|1|I|A|181
7S1I|1|I|A|182
7S1I|1|I|C|183
*
7S1I|1|I|G|214
7S1I|1|I|G|215
7S1I|1|I|A|216
7S1I|1|I|A|217
7S1I|1|I|A|218
7S1I|1|I|A|219
7S1I|1|I|G|220
7S1I|1|I|A|221
7S1I|1|I|A|222
7S1I|1|I|A|223
7S1I|1|I|U|224
*
7S1I|1|I|A|231
7S1I|1|I|G|232
7S1I|1|I|A|233
7S1I|1|I|U|234
7S1I|1|I|U|235
*
7S1I|1|I|A|262
7S1I|1|I|G|263
7S1I|1|I|C|264
7S1I|1|I|A|265
7S1I|1|I|G|266
*
7S1I|1|I|C|426
7S1I|1|I|U|427
7S1I|1|I|A|428
7S1I|1|I|A|429
7S1I|1|I|A|430
7S1I|1|I|U|431
7S1I|1|I|A|432
7S1I|1|I|C|433

Current chains

Chain I

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L34