J6_7S1J_001

3D structure

PDB id

7S1J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7S1J|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S1J|1|I|G|45
7S1J|1|I|G|46
*
7S1J|1|I|C|179
7S1J|1|I|G|180
7S1J|1|I|A|181
7S1J|1|I|A|182
7S1J|1|I|C|183
*
7S1J|1|I|G|214
7S1J|1|I|G|215
7S1J|1|I|A|216
7S1J|1|I|A|217
7S1J|1|I|A|218
7S1J|1|I|A|219
7S1J|1|I|G|220
7S1J|1|I|A|221
7S1J|1|I|A|222
7S1J|1|I|A|223
7S1J|1|I|U|224
*
7S1J|1|I|A|231
7S1J|1|I|G|232
7S1J|1|I|A|233
7S1J|1|I|U|234
7S1J|1|I|U|235
*
7S1J|1|I|A|262
7S1J|1|I|G|263
7S1J|1|I|C|264
7S1J|1|I|A|265
7S1J|1|I|G|266
*
7S1J|1|I|C|426
7S1J|1|I|U|427
7S1J|1|I|A|428
7S1J|1|I|A|429
7S1J|1|I|A|430
7S1J|1|I|U|431
7S1J|1|I|A|432
7S1J|1|I|C|433

Current chains

Chain I

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L34