J6_7S1K_001

3D structure

PDB id

7S1K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7S1K|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S1K|1|I|G|45
7S1K|1|I|G|46
*
7S1K|1|I|C|179
7S1K|1|I|G|180
7S1K|1|I|A|181
7S1K|1|I|A|182
7S1K|1|I|C|183
*
7S1K|1|I|G|214
7S1K|1|I|G|215
7S1K|1|I|A|216
7S1K|1|I|A|217
7S1K|1|I|A|218
7S1K|1|I|A|219
7S1K|1|I|G|220
7S1K|1|I|A|221
7S1K|1|I|A|222
7S1K|1|I|A|223
7S1K|1|I|U|224
*
7S1K|1|I|A|231
7S1K|1|I|G|232
7S1K|1|I|A|233
7S1K|1|I|U|234
7S1K|1|I|U|235
*
7S1K|1|I|A|262
7S1K|1|I|G|263
7S1K|1|I|C|264
7S1K|1|I|A|265
7S1K|1|I|G|266
*
7S1K|1|I|C|426
7S1K|1|I|U|427
7S1K|1|I|A|428
7S1K|1|I|A|429
7S1K|1|I|A|430
7S1K|1|I|U|431
7S1K|1|I|A|432
7S1K|1|I|C|433

Current chains

Chain I

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L34