J6_7ST7_001
3D structure
- PDB id
- 7ST7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 7ST7|1|1|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ST7|1|1|G|45
7ST7|1|1|G|46
*
7ST7|1|1|C|179
7ST7|1|1|G|180
7ST7|1|1|A|181
7ST7|1|1|A|182
7ST7|1|1|C|183
*
7ST7|1|1|G|214
7ST7|1|1|G|215
7ST7|1|1|A|216
7ST7|1|1|A|217
7ST7|1|1|A|218
7ST7|1|1|A|219
7ST7|1|1|G|220
7ST7|1|1|A|221
7ST7|1|1|A|222
7ST7|1|1|A|223
7ST7|1|1|U|224
*
7ST7|1|1|A|231
7ST7|1|1|G|232
7ST7|1|1|A|233
7ST7|1|1|U|234
7ST7|1|1|U|235
*
7ST7|1|1|A|262
7ST7|1|1|G|263
7ST7|1|1|C|264
7ST7|1|1|A|265
7ST7|1|1|G|266
*
7ST7|1|1|C|426
7ST7|1|1|U|427
7ST7|1|1|A|428
7ST7|1|1|A|429
7ST7|1|1|A|430
7ST7|1|1|U|431
7ST7|1|1|A|432
7ST7|1|1|C|433
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L34
Coloring options: