J6_7TUT_003
3D structure
- PDB id
- 7TUT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.88 Å
Loop
- Sequence
- UUGAC*GUUUG*CA*UGUC*GCCUCACGAUCC*GGUGUCAGAAAA
- Length
- 40 nucleotides
- Bulged bases
- 7TUT|1|K|G|3922, 7TUT|1|K|A|4376, 7TUT|1|K|A|4378, 7TUT|1|K|A|4379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TUT|1|K|U|3920
7TUT|1|K|U|3921
7TUT|1|K|G|3922
7TUT|1|K|A|3923
7TUT|1|K|C|3924
*
7TUT|1|K|G|4187
7TUT|1|K|U|4188
7TUT|1|K|U|4189
7TUT|1|K|U|4190
7TUT|1|K|G|4191
*
7TUT|1|K|C|4204
7TUT|1|K|A|4205
*
7TUT|1|K|U|4227
7TUT|1|K|G|4228
7TUT|1|K|U|4229
7TUT|1|K|C|4230
*
7TUT|1|K|G|4331
7TUT|1|K|C|4332
7TUT|1|K|C|4333
7TUT|1|K|U|4334
7TUT|1|K|C|4335
7TUT|1|K|A|4336
7TUT|1|K|C|4337
7TUT|1|K|G|4338
7TUT|1|K|A|4339
7TUT|1|K|U|4340
7TUT|1|K|C|4341
7TUT|1|K|C|4342
*
7TUT|1|K|G|4370
7TUT|1|K|G|4371
7TUT|1|K|U|4372
7TUT|1|K|G|4373
7TUT|1|K|U|4374
7TUT|1|K|C|4375
7TUT|1|K|A|4376
7TUT|1|K|G|4377
7TUT|1|K|A|4378
7TUT|1|K|A|4379
7TUT|1|K|A|4380
7TUT|1|K|A|4381
Current chains
- Chain K
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein L8
- Chain N
- Ribosomal protein L15
- Chain Q
- eL18
- Chain T
- eL21
- Chain a
- 60S ribosomal protein L27a
- Chain b
- eL29
- Chain o
- eL42
- Chain q
- Transfer RNA; tRNA
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