J6_7U2J_003

3D structure

PDB id

7U2J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

7U2J|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7U2J|1|2A|G|44
7U2J|1|2A|C|45
*
7U2J|1|2A|G|179
7U2J|1|2A|G|180
7U2J|1|2A|A|181
7U2J|1|2A|A|182
7U2J|1|2A|C|183
*
7U2J|1|2A|G|214
7U2J|1|2A|G|215
7U2J|1|2A|A|216
7U2J|1|2A|G|217
7U2J|1|2A|A|218
7U2J|1|2A|G|219
7U2J|1|2A|G|220
7U2J|1|2A|A|221
7U2J|1|2A|A|222
7U2J|1|2A|A|223
7U2J|1|2A|G|224
*
7U2J|1|2A|C|231
7U2J|1|2A|G|232
7U2J|1|2A|A|233
7U2J|1|2A|C|234
7U2J|1|2A|U|235
*
7U2J|1|2A|A|262
7U2J|1|2A|C|263
7U2J|1|2A|C|264
7U2J|1|2A|A|265
7U2J|1|2A|G|266
*
7U2J|1|2A|C|426
7U2J|1|2A|U|427
7U2J|1|2A|A|428
7U2J|1|2A|A|429
7U2J|1|2A|G|430
7U2J|1|2A|U|431
7U2J|1|2A|A|432
7U2J|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34