3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
Length
41 nucleotides
Bulged bases
7UG7|1|23|U|2076, 7UG7|1|23|A|2388, 7UG7|1|23|U|2390, 7UG7|1|23|G|2428, 7UG7|1|23|A|2430, 7UG7|1|23|U|2431
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UG7|1|23|U|2074
7UG7|1|23|U|2075
7UG7|1|23|U|2076
7UG7|1|23|A|2077
*
7UG7|1|23|U|2243
7UG7|1|23|U|2244
7UG7|1|23|U|2245
7UG7|1|23|G|2246
*
7UG7|1|23|C|2258
7UG7|1|23|U|2259
*
7UG7|1|23|A|2281
7UG7|1|23|G|2282
7UG7|1|23|C|2283
7UG7|1|23|A|2284
*
7UG7|1|23|U|2384
7UG7|1|23|C|2385
7UG7|1|23|A|2386
7UG7|1|23|U|2387
7UG7|1|23|A|2388
7UG7|1|23|G|2389
7UG7|1|23|U|2390
7UG7|1|23|G|2391
7UG7|1|23|A|2392
7UG7|1|23|U|2393
7UG7|1|23|C|2394
7UG7|1|23|C|2395
*
7UG7|1|23|G|2421
7UG7|1|23|C|2422
7UG7|1|23|U|2423
7UG7|1|23|C|2424
7UG7|1|23|A|2425
7UG7|1|23|A|2426
7UG7|1|23|C|2427
7UG7|1|23|G|2428
7UG7|1|23|G|2429
7UG7|1|23|A|2430
7UG7|1|23|U|2431
7UG7|1|23|A|2432
7UG7|1|23|A|2433
7UG7|1|23|A|2434
7UG7|1|23|A|2435

Current chains

Chain 23
23S rRNA

Nearby chains

Chain Dt
Transfer RNA; tRNA
Chain LB
50S ribosomal protein L2
Chain LO
50S ribosomal protein L15
Chain La
50S ribosomal protein L27
Chain Lb
50S ribosomal protein L28
Chain Lg
50S ribosomal protein L33
Chain Li
50S ribosomal protein L35

Coloring options:

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