J6_7ZOD_001
3D structure
- PDB id
- 7ZOD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 7ZOD|1|b|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZOD|1|b|G|45
7ZOD|1|b|G|46
*
7ZOD|1|b|C|179
7ZOD|1|b|G|180
7ZOD|1|b|A|181
7ZOD|1|b|A|182
7ZOD|1|b|C|183
*
7ZOD|1|b|G|214
7ZOD|1|b|G|215
7ZOD|1|b|A|216
7ZOD|1|b|A|217
7ZOD|1|b|A|218
7ZOD|1|b|A|219
7ZOD|1|b|G|220
7ZOD|1|b|A|221
7ZOD|1|b|A|222
7ZOD|1|b|A|223
7ZOD|1|b|U|224
*
7ZOD|1|b|A|231
7ZOD|1|b|G|232
7ZOD|1|b|A|233
7ZOD|1|b|U|234
7ZOD|1|b|U|235
*
7ZOD|1|b|A|262
7ZOD|1|b|G|263
7ZOD|1|b|C|264
7ZOD|1|b|A|265
7ZOD|1|b|G|266
*
7ZOD|1|b|C|426
7ZOD|1|b|U|427
7ZOD|1|b|A|428
7ZOD|1|b|A|429
7ZOD|1|b|A|430
7ZOD|1|b|U|431
7ZOD|1|b|A|432
7ZOD|1|b|C|433
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
Coloring options: