J6_7ZRS_001

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CAUC*GAGUAC*GGAAAAGAAAC*GGAUU*AAAAG*CUAAAUAUUGG

Length

42 nucleotides

Bulged bases

7ZRS|1|3|U|34, 7ZRS|1|5|A|67, 7ZRS|1|5|U|329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZRS|1|3|C|32
7ZRS|1|3|A|33
7ZRS|1|3|U|34
7ZRS|1|3|C|35
*
7ZRS|1|5|G|22
7ZRS|1|5|A|23
7ZRS|1|5|G|24
7ZRS|1|5|U|25
7ZRS|1|5|A|26
7ZRS|1|5|C|27
*
7ZRS|1|5|G|58
7ZRS|1|5|G|59
7ZRS|1|5|A|60
7ZRS|1|5|A|61
7ZRS|1|5|A|62
7ZRS|1|5|A|63
7ZRS|1|5|G|64
7ZRS|1|5|A|65
7ZRS|1|5|A|66
7ZRS|1|5|A|67
7ZRS|1|5|C|68
*
7ZRS|1|5|G|75
7ZRS|1|5|G|76
7ZRS|1|5|A|77
7ZRS|1|5|U|78
7ZRS|1|5|U|79
*
7ZRS|1|5|A|106
7ZRS|1|5|A|107
7ZRS|1|5|A|108
7ZRS|1|5|A|109
7ZRS|1|5|G|110
*
7ZRS|1|5|C|321
7ZRS|1|5|U|322
7ZRS|1|5|A|323
7ZRS|1|5|A|324
7ZRS|1|5|A|325
7ZRS|1|5|U|326
7ZRS|1|5|A|327
7ZRS|1|5|U|328
7ZRS|1|5|U|329
7ZRS|1|5|G|330
7ZRS|1|5|G|331

Current chains

Chain 3

5.8S ribosomal RNA

Chain 5

25S ribosomal RNA

Nearby chains

Chain BC

RPL4A isoform 1

Chain BK

60S ribosomal protein L13-A

Chain BM

60S ribosomal protein L15-A

Chain Bg

60S ribosomal protein L35-A

Chain Bh

60S ribosomal protein L36-A

Chain Bi

60S ribosomal protein L37-A