J6_7ZUX_001

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CAUC*GAGUAC*GGAAAAGAAAC*GGAUU*AAAAG*CUAAAUAUUGG

Length

42 nucleotides

Bulged bases

7ZUX|1|3|U|34, 7ZUX|1|5|A|67, 7ZUX|1|5|U|329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZUX|1|3|C|32
7ZUX|1|3|A|33
7ZUX|1|3|U|34
7ZUX|1|3|C|35
*
7ZUX|1|5|G|22
7ZUX|1|5|A|23
7ZUX|1|5|G|24
7ZUX|1|5|U|25
7ZUX|1|5|A|26
7ZUX|1|5|C|27
*
7ZUX|1|5|G|58
7ZUX|1|5|G|59
7ZUX|1|5|A|60
7ZUX|1|5|A|61
7ZUX|1|5|A|62
7ZUX|1|5|A|63
7ZUX|1|5|G|64
7ZUX|1|5|A|65
7ZUX|1|5|A|66
7ZUX|1|5|A|67
7ZUX|1|5|C|68
*
7ZUX|1|5|G|75
7ZUX|1|5|G|76
7ZUX|1|5|A|77
7ZUX|1|5|U|78
7ZUX|1|5|U|79
*
7ZUX|1|5|A|106
7ZUX|1|5|A|107
7ZUX|1|5|A|108
7ZUX|1|5|A|109
7ZUX|1|5|G|110
*
7ZUX|1|5|C|321
7ZUX|1|5|U|322
7ZUX|1|5|A|323
7ZUX|1|5|A|324
7ZUX|1|5|A|325
7ZUX|1|5|U|326
7ZUX|1|5|A|327
7ZUX|1|5|U|328
7ZUX|1|5|U|329
7ZUX|1|5|G|330
7ZUX|1|5|G|331

Current chains

Chain 3

5.8S ribosomal RNA

Chain 5

25S ribosomal RNA

Nearby chains

Chain EC

60S ribosomal protein L4-A

Chain EK

60S ribosomal protein L13-A

Chain EM

60S ribosomal protein L15-A

Chain Eg

60S ribosomal protein L35-A

Chain Eh

60S ribosomal protein L36-A

Chain Ei

60S ribosomal protein L37-A