J6_8A3L_001

3D structure

PDB id

8A3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into the binding of bS1 to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGGAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8A3L|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A3L|1|a|G|45
8A3L|1|a|G|46
*
8A3L|1|a|C|179
8A3L|1|a|G|180
8A3L|1|a|A|181
8A3L|1|a|A|182
8A3L|1|a|C|183
*
8A3L|1|a|G|214
8A3L|1|a|G|215
8A3L|1|a|A|216
8A3L|1|a|A|217
8A3L|1|a|A|218
8A3L|1|a|A|219
8A3L|1|a|G|220
8A3L|1|a|A|221
8A3L|1|a|A|222
8A3L|1|a|A|223
8A3L|1|a|U|224
*
8A3L|1|a|A|231
8A3L|1|a|G|232
8A3L|1|a|A|233
8A3L|1|a|U|234
8A3L|1|a|U|235
*
8A3L|1|a|A|262
8A3L|1|a|G|263
8A3L|1|a|G|264
8A3L|1|a|A|265
8A3L|1|a|G|266
*
8A3L|1|a|C|426
8A3L|1|a|U|427
8A3L|1|a|A|428
8A3L|1|a|A|429
8A3L|1|a|A|430
8A3L|1|a|U|431
8A3L|1|a|A|432
8A3L|1|a|C|433

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34