J6_8AP4_001

3D structure

PDB id

8AP4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8AP4|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AP4|1|a|G|45
8AP4|1|a|G|46
*
8AP4|1|a|C|179
8AP4|1|a|G|180
8AP4|1|a|A|181
8AP4|1|a|A|182
8AP4|1|a|C|183
*
8AP4|1|a|G|214
8AP4|1|a|G|215
8AP4|1|a|A|216
8AP4|1|a|A|217
8AP4|1|a|A|218
8AP4|1|a|A|219
8AP4|1|a|G|220
8AP4|1|a|A|221
8AP4|1|a|A|222
8AP4|1|a|A|223
8AP4|1|a|U|224
*
8AP4|1|a|A|231
8AP4|1|a|G|232
8AP4|1|a|A|233
8AP4|1|a|U|234
8AP4|1|a|U|235
*
8AP4|1|a|A|262
8AP4|1|a|G|263
8AP4|1|a|C|264
8AP4|1|a|A|265
8AP4|1|a|G|266
*
8AP4|1|a|C|426
8AP4|1|a|U|427
8AP4|1|a|A|428
8AP4|1|a|A|429
8AP4|1|a|A|430
8AP4|1|a|U|431
8AP4|1|a|A|432
8AP4|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34