J6_8BF7_001

3D structure

PDB id

8BF7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8BF7|1|0|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BF7|1|0|G|45
8BF7|1|0|G|46
*
8BF7|1|0|C|179
8BF7|1|0|G|180
8BF7|1|0|A|181
8BF7|1|0|A|182
8BF7|1|0|C|183
*
8BF7|1|0|G|214
8BF7|1|0|G|215
8BF7|1|0|A|216
8BF7|1|0|A|217
8BF7|1|0|A|218
8BF7|1|0|A|219
8BF7|1|0|G|220
8BF7|1|0|A|221
8BF7|1|0|A|222
8BF7|1|0|A|223
8BF7|1|0|U|224
*
8BF7|1|0|A|231
8BF7|1|0|G|232
8BF7|1|0|A|233
8BF7|1|0|U|234
8BF7|1|0|U|235
*
8BF7|1|0|A|262
8BF7|1|0|G|263
8BF7|1|0|C|264
8BF7|1|0|A|265
8BF7|1|0|G|266
*
8BF7|1|0|C|426
8BF7|1|0|U|427
8BF7|1|0|A|428
8BF7|1|0|A|429
8BF7|1|0|A|430
8BF7|1|0|U|431
8BF7|1|0|A|432
8BF7|1|0|C|433

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain c

50S ribosomal protein L34