J6_8BHJ_001

3D structure

PDB id

8BHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUUC*GAGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

8BHJ|1|0|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHJ|1|0|G|45
8BHJ|1|0|G|46
*
8BHJ|1|0|C|179
8BHJ|1|0|G|180
8BHJ|1|0|A|181
8BHJ|1|0|A|182
8BHJ|1|0|C|183
*
8BHJ|1|0|G|214
8BHJ|1|0|G|215
8BHJ|1|0|A|216
8BHJ|1|0|A|217
8BHJ|1|0|A|218
8BHJ|1|0|A|219
8BHJ|1|0|G|220
8BHJ|1|0|A|221
8BHJ|1|0|A|222
8BHJ|1|0|A|223
8BHJ|1|0|U|224
*
8BHJ|1|0|A|231
8BHJ|1|0|G|232
8BHJ|1|0|A|233
8BHJ|1|0|U|234
8BHJ|1|0|U|235
8BHJ|1|0|C|236
*
8BHJ|1|0|G|261
8BHJ|1|0|A|262
8BHJ|1|0|G|263
8BHJ|1|0|C|264
8BHJ|1|0|A|265
8BHJ|1|0|G|266
*
8BHJ|1|0|C|426
8BHJ|1|0|U|427
8BHJ|1|0|A|428
8BHJ|1|0|A|429
8BHJ|1|0|A|430
8BHJ|1|0|U|431
8BHJ|1|0|A|432
8BHJ|1|0|C|433

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain c

50S ribosomal protein L34