J6_8BHL_001

3D structure

PDB id

8BHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8BHL|1|0|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHL|1|0|G|45
8BHL|1|0|G|46
*
8BHL|1|0|C|179
8BHL|1|0|G|180
8BHL|1|0|A|181
8BHL|1|0|A|182
8BHL|1|0|C|183
*
8BHL|1|0|G|214
8BHL|1|0|G|215
8BHL|1|0|A|216
8BHL|1|0|A|217
8BHL|1|0|A|218
8BHL|1|0|A|219
8BHL|1|0|G|220
8BHL|1|0|A|221
8BHL|1|0|A|222
8BHL|1|0|A|223
8BHL|1|0|U|224
*
8BHL|1|0|A|231
8BHL|1|0|G|232
8BHL|1|0|A|233
8BHL|1|0|U|234
8BHL|1|0|U|235
*
8BHL|1|0|A|262
8BHL|1|0|G|263
8BHL|1|0|C|264
8BHL|1|0|A|265
8BHL|1|0|G|266
*
8BHL|1|0|C|426
8BHL|1|0|U|427
8BHL|1|0|A|428
8BHL|1|0|A|429
8BHL|1|0|A|430
8BHL|1|0|U|431
8BHL|1|0|A|432
8BHL|1|0|C|433

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain c

50S ribosomal protein L34