J6_8BHN_001

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUUC*GAGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

8BHN|1|0|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHN|1|0|G|45
8BHN|1|0|G|46
*
8BHN|1|0|C|179
8BHN|1|0|G|180
8BHN|1|0|A|181
8BHN|1|0|A|182
8BHN|1|0|C|183
*
8BHN|1|0|G|214
8BHN|1|0|G|215
8BHN|1|0|A|216
8BHN|1|0|A|217
8BHN|1|0|A|218
8BHN|1|0|A|219
8BHN|1|0|G|220
8BHN|1|0|A|221
8BHN|1|0|A|222
8BHN|1|0|A|223
8BHN|1|0|U|224
*
8BHN|1|0|A|231
8BHN|1|0|G|232
8BHN|1|0|A|233
8BHN|1|0|U|234
8BHN|1|0|U|235
8BHN|1|0|C|236
*
8BHN|1|0|G|261
8BHN|1|0|A|262
8BHN|1|0|G|263
8BHN|1|0|C|264
8BHN|1|0|A|265
8BHN|1|0|G|266
*
8BHN|1|0|C|426
8BHN|1|0|U|427
8BHN|1|0|A|428
8BHN|1|0|A|429
8BHN|1|0|A|430
8BHN|1|0|U|431
8BHN|1|0|A|432
8BHN|1|0|C|433

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain c

50S ribosomal protein L34