J6_8BHP_001

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8BHP|1|0|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHP|1|0|G|45
8BHP|1|0|G|46
*
8BHP|1|0|C|179
8BHP|1|0|G|180
8BHP|1|0|A|181
8BHP|1|0|A|182
8BHP|1|0|C|183
*
8BHP|1|0|G|214
8BHP|1|0|G|215
8BHP|1|0|A|216
8BHP|1|0|A|217
8BHP|1|0|A|218
8BHP|1|0|A|219
8BHP|1|0|G|220
8BHP|1|0|A|221
8BHP|1|0|A|222
8BHP|1|0|A|223
8BHP|1|0|U|224
*
8BHP|1|0|A|231
8BHP|1|0|G|232
8BHP|1|0|A|233
8BHP|1|0|U|234
8BHP|1|0|U|235
*
8BHP|1|0|A|262
8BHP|1|0|G|263
8BHP|1|0|C|264
8BHP|1|0|A|265
8BHP|1|0|G|266
*
8BHP|1|0|C|426
8BHP|1|0|U|427
8BHP|1|0|A|428
8BHP|1|0|A|429
8BHP|1|0|A|430
8BHP|1|0|U|431
8BHP|1|0|A|432
8BHP|1|0|C|433

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain c

50S ribosomal protein L34