J6_8BUU_001
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GC*GCAGAC*GGAAGAGAAAG*CGAUU*AUUAG*CUAAAUAC
- Length
- 37 nucleotides
- Bulged bases
- 8BUU|1|A|G|184, 8BUU|1|A|A|226
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BUU|1|A|G|45
8BUU|1|A|C|46
*
8BUU|1|A|G|181
8BUU|1|A|C|182
8BUU|1|A|A|183
8BUU|1|A|G|184
8BUU|1|A|A|185
8BUU|1|A|C|186
*
8BUU|1|A|G|217
8BUU|1|A|G|218
8BUU|1|A|A|219
8BUU|1|A|A|220
8BUU|1|A|G|221
8BUU|1|A|A|222
8BUU|1|A|G|223
8BUU|1|A|A|224
8BUU|1|A|A|225
8BUU|1|A|A|226
8BUU|1|A|G|227
*
8BUU|1|A|C|234
8BUU|1|A|G|235
8BUU|1|A|A|236
8BUU|1|A|U|237
8BUU|1|A|U|238
*
8BUU|1|A|A|265
8BUU|1|A|U|266
8BUU|1|A|U|267
8BUU|1|A|A|268
8BUU|1|A|G|269
*
8BUU|1|A|C|473
8BUU|1|A|U|474
8BUU|1|A|A|475
8BUU|1|A|A|476
8BUU|1|A|A|477
8BUU|1|A|U|478
8BUU|1|A|A|479
8BUU|1|A|C|480
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain E
- 50S ribosomal protein L4
Coloring options: