J6_8BUU_002
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 8BUU|1|A|U|2105, 8BUU|1|A|A|2417, 8BUU|1|A|U|2419, 8BUU|1|A|G|2457, 8BUU|1|A|A|2459, 8BUU|1|A|U|2460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BUU|1|A|U|2103
8BUU|1|A|U|2104
8BUU|1|A|U|2105
8BUU|1|A|A|2106
*
8BUU|1|A|U|2272
8BUU|1|A|U|2273
8BUU|1|A|U|2274
8BUU|1|A|G|2275
*
8BUU|1|A|C|2287
8BUU|1|A|G|2288
*
8BUU|1|A|C|2310
8BUU|1|A|G|2311
8BUU|1|A|C|2312
8BUU|1|A|C|2313
*
8BUU|1|A|G|2413
8BUU|1|A|C|2414
8BUU|1|A|U|2415
8BUU|1|A|U|2416
8BUU|1|A|A|2417
8BUU|1|A|G|2418
8BUU|1|A|U|2419
8BUU|1|A|G|2420
8BUU|1|A|A|2421
8BUU|1|A|U|2422
8BUU|1|A|C|2423
8BUU|1|A|C|2424
*
8BUU|1|A|G|2450
8BUU|1|A|C|2451
8BUU|1|A|U|2452
8BUU|1|A|C|2453
8BUU|1|A|A|2454
8BUU|1|A|A|2455
8BUU|1|A|C|2456
8BUU|1|A|G|2457
8BUU|1|A|G|2458
8BUU|1|A|A|2459
8BUU|1|A|U|2460
8BUU|1|A|A|2461
8BUU|1|A|A|2462
8BUU|1|A|A|2463
8BUU|1|A|A|2464
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33 1
- Chain 3
- 50S ribosomal protein L35
- Chain 9
- ExpZ
- Chain C
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
- Chain X
- 50S ribosomal protein L28
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