J6_8C98_001

3D structure

PDB id

8C98 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.66 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8C98|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C98|1|A|G|45
8C98|1|A|G|46
*
8C98|1|A|C|179
8C98|1|A|G|180
8C98|1|A|A|181
8C98|1|A|A|182
8C98|1|A|C|183
*
8C98|1|A|G|214
8C98|1|A|G|215
8C98|1|A|A|216
8C98|1|A|A|217
8C98|1|A|A|218
8C98|1|A|A|219
8C98|1|A|G|220
8C98|1|A|A|221
8C98|1|A|A|222
8C98|1|A|A|223
8C98|1|A|U|224
*
8C98|1|A|A|231
8C98|1|A|G|232
8C98|1|A|A|233
8C98|1|A|U|234
8C98|1|A|U|235
*
8C98|1|A|A|262
8C98|1|A|G|263
8C98|1|A|C|264
8C98|1|A|A|265
8C98|1|A|G|266
*
8C98|1|A|C|426
8C98|1|A|U|427
8C98|1|A|A|428
8C98|1|A|A|429
8C98|1|A|A|430
8C98|1|A|U|431
8C98|1|A|A|432
8C98|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34