J6_8CEU_001

3D structure

PDB id

8CEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Retapamulin and Capreomycin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.83 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8CEU|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CEU|1|a|G|45
8CEU|1|a|G|46
*
8CEU|1|a|C|179
8CEU|1|a|G|180
8CEU|1|a|A|181
8CEU|1|a|A|182
8CEU|1|a|C|183
*
8CEU|1|a|G|214
8CEU|1|a|G|215
8CEU|1|a|A|216
8CEU|1|a|A|217
8CEU|1|a|A|218
8CEU|1|a|A|219
8CEU|1|a|G|220
8CEU|1|a|A|221
8CEU|1|a|A|222
8CEU|1|a|A|223
8CEU|1|a|U|224
*
8CEU|1|a|A|231
8CEU|1|a|G|232
8CEU|1|a|A|233
8CEU|1|a|U|234
8CEU|1|a|U|235
*
8CEU|1|a|A|262
8CEU|1|a|G|263
8CEU|1|a|C|264
8CEU|1|a|A|265
8CEU|1|a|G|266
*
8CEU|1|a|C|426
8CEU|1|a|U|427
8CEU|1|a|A|428
8CEU|1|a|A|429
8CEU|1|a|A|430
8CEU|1|a|U|431
8CEU|1|a|A|432
8CEU|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34