J6_8CGV_001

3D structure

PDB id

8CGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tiamulin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.66 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8CGV|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CGV|1|a|G|45
8CGV|1|a|G|46
*
8CGV|1|a|C|179
8CGV|1|a|G|180
8CGV|1|a|A|181
8CGV|1|a|A|182
8CGV|1|a|C|183
*
8CGV|1|a|G|214
8CGV|1|a|G|215
8CGV|1|a|A|216
8CGV|1|a|A|217
8CGV|1|a|A|218
8CGV|1|a|A|219
8CGV|1|a|G|220
8CGV|1|a|A|221
8CGV|1|a|A|222
8CGV|1|a|A|223
8CGV|1|a|U|224
*
8CGV|1|a|A|231
8CGV|1|a|G|232
8CGV|1|a|A|233
8CGV|1|a|U|234
8CGV|1|a|U|235
*
8CGV|1|a|A|262
8CGV|1|a|G|263
8CGV|1|a|C|264
8CGV|1|a|A|265
8CGV|1|a|G|266
*
8CGV|1|a|C|426
8CGV|1|a|U|427
8CGV|1|a|A|428
8CGV|1|a|A|429
8CGV|1|a|A|430
8CGV|1|a|U|431
8CGV|1|a|A|432
8CGV|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34