J6_8CVK_003
3D structure
- PDB id
- 8CVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
- Length
- 36 nucleotides
- Bulged bases
- 8CVK|1|2A|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CVK|1|2A|G|44
8CVK|1|2A|C|45
*
8CVK|1|2A|G|179
8CVK|1|2A|G|180
8CVK|1|2A|A|181
8CVK|1|2A|A|182
8CVK|1|2A|C|183
*
8CVK|1|2A|G|214
8CVK|1|2A|G|215
8CVK|1|2A|A|216
8CVK|1|2A|G|217
8CVK|1|2A|A|218
8CVK|1|2A|G|219
8CVK|1|2A|G|220
8CVK|1|2A|A|221
8CVK|1|2A|A|222
8CVK|1|2A|A|223
8CVK|1|2A|G|224
*
8CVK|1|2A|C|231
8CVK|1|2A|G|232
8CVK|1|2A|A|233
8CVK|1|2A|C|234
8CVK|1|2A|U|235
*
8CVK|1|2A|A|262
8CVK|1|2A|C|263
8CVK|1|2A|C|264
8CVK|1|2A|A|265
8CVK|1|2A|G|266
*
8CVK|1|2A|C|426
8CVK|1|2A|U|427
8CVK|1|2A|A|428
8CVK|1|2A|A|429
8CVK|1|2A|G|430
8CVK|1|2A|U|431
8CVK|1|2A|A|432
8CVK|1|2A|C|433
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 27
- 50S ribosomal protein L34
Coloring options: