J6_8E36_001

3D structure

PDB id

8E36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3146

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8E36|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E36|1|I|G|45
8E36|1|I|G|46
*
8E36|1|I|C|179
8E36|1|I|G|180
8E36|1|I|A|181
8E36|1|I|A|182
8E36|1|I|C|183
*
8E36|1|I|G|214
8E36|1|I|G|215
8E36|1|I|A|216
8E36|1|I|A|217
8E36|1|I|A|218
8E36|1|I|A|219
8E36|1|I|G|220
8E36|1|I|A|221
8E36|1|I|A|222
8E36|1|I|A|223
8E36|1|I|U|224
*
8E36|1|I|A|231
8E36|1|I|G|232
8E36|1|I|A|233
8E36|1|I|U|234
8E36|1|I|U|235
*
8E36|1|I|A|262
8E36|1|I|G|263
8E36|1|I|C|264
8E36|1|I|A|265
8E36|1|I|G|266
*
8E36|1|I|C|426
8E36|1|I|U|427
8E36|1|I|A|428
8E36|1|I|A|429
8E36|1|I|A|430
8E36|1|I|U|431
8E36|1|I|A|432
8E36|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain R

50S ribosomal protein L34