J6_8E3L_001

3D structure

PDB id

8E3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to D-linker solithromycin conjugate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8E3L|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E3L|1|I|G|45
8E3L|1|I|G|46
*
8E3L|1|I|C|179
8E3L|1|I|G|180
8E3L|1|I|A|181
8E3L|1|I|A|182
8E3L|1|I|C|183
*
8E3L|1|I|G|214
8E3L|1|I|G|215
8E3L|1|I|A|216
8E3L|1|I|A|217
8E3L|1|I|A|218
8E3L|1|I|A|219
8E3L|1|I|G|220
8E3L|1|I|A|221
8E3L|1|I|A|222
8E3L|1|I|A|223
8E3L|1|I|U|224
*
8E3L|1|I|A|231
8E3L|1|I|G|232
8E3L|1|I|A|233
8E3L|1|I|U|234
8E3L|1|I|U|235
*
8E3L|1|I|A|262
8E3L|1|I|G|263
8E3L|1|I|C|264
8E3L|1|I|A|265
8E3L|1|I|G|266
*
8E3L|1|I|C|426
8E3L|1|I|U|427
8E3L|1|I|A|428
8E3L|1|I|A|429
8E3L|1|I|A|430
8E3L|1|I|U|431
8E3L|1|I|A|432
8E3L|1|I|C|433

Current chains

Chain I

50S ribosomal RNA

Nearby chains

Chain R

50S ribosomal protein L34