J6_8E3M_001
3D structure
- PDB id
- 8E3M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to L-linker solithromycin conjugate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 8E3M|1|I|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8E3M|1|I|G|45
8E3M|1|I|G|46
*
8E3M|1|I|C|179
8E3M|1|I|G|180
8E3M|1|I|A|181
8E3M|1|I|A|182
8E3M|1|I|C|183
*
8E3M|1|I|G|214
8E3M|1|I|G|215
8E3M|1|I|A|216
8E3M|1|I|A|217
8E3M|1|I|A|218
8E3M|1|I|A|219
8E3M|1|I|G|220
8E3M|1|I|A|221
8E3M|1|I|A|222
8E3M|1|I|A|223
8E3M|1|I|U|224
*
8E3M|1|I|A|231
8E3M|1|I|G|232
8E3M|1|I|A|233
8E3M|1|I|U|234
8E3M|1|I|U|235
*
8E3M|1|I|A|262
8E3M|1|I|G|263
8E3M|1|I|C|264
8E3M|1|I|A|265
8E3M|1|I|G|266
*
8E3M|1|I|C|426
8E3M|1|I|U|427
8E3M|1|I|A|428
8E3M|1|I|A|429
8E3M|1|I|A|430
8E3M|1|I|U|431
8E3M|1|I|A|432
8E3M|1|I|C|433
Current chains
- Chain I
- 50S ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L34
Coloring options: