J6_8E49_001
3D structure
- PDB id
- 8E49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to antibiotic analog SLC31
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.05 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 8E49|1|I|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8E49|1|I|G|45
8E49|1|I|G|46
*
8E49|1|I|C|179
8E49|1|I|G|180
8E49|1|I|A|181
8E49|1|I|A|182
8E49|1|I|C|183
*
8E49|1|I|G|214
8E49|1|I|G|215
8E49|1|I|A|216
8E49|1|I|A|217
8E49|1|I|A|218
8E49|1|I|A|219
8E49|1|I|G|220
8E49|1|I|A|221
8E49|1|I|A|222
8E49|1|I|A|223
8E49|1|I|U|224
*
8E49|1|I|A|231
8E49|1|I|G|232
8E49|1|I|A|233
8E49|1|I|U|234
8E49|1|I|U|235
*
8E49|1|I|A|262
8E49|1|I|G|263
8E49|1|I|C|264
8E49|1|I|A|265
8E49|1|I|G|266
*
8E49|1|I|C|426
8E49|1|I|U|427
8E49|1|I|A|428
8E49|1|I|A|429
8E49|1|I|A|430
8E49|1|I|U|431
8E49|1|I|A|432
8E49|1|I|C|433
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L34
Coloring options: