J6_8EV7_003

3D structure

PDB id

8EV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.89 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

8EV7|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV7|1|2A|G|44
8EV7|1|2A|C|45
*
8EV7|1|2A|G|179
8EV7|1|2A|G|180
8EV7|1|2A|A|181
8EV7|1|2A|A|182
8EV7|1|2A|C|183
*
8EV7|1|2A|G|214
8EV7|1|2A|G|215
8EV7|1|2A|A|216
8EV7|1|2A|G|217
8EV7|1|2A|A|218
8EV7|1|2A|G|219
8EV7|1|2A|G|220
8EV7|1|2A|A|221
8EV7|1|2A|A|222
8EV7|1|2A|A|223
8EV7|1|2A|G|224
*
8EV7|1|2A|C|231
8EV7|1|2A|G|232
8EV7|1|2A|A|233
8EV7|1|2A|C|234
8EV7|1|2A|U|235
*
8EV7|1|2A|A|262
8EV7|1|2A|C|263
8EV7|1|2A|C|264
8EV7|1|2A|A|265
8EV7|1|2A|G|266
*
8EV7|1|2A|C|426
8EV7|1|2A|U|427
8EV7|1|2A|A|428
8EV7|1|2A|A|429
8EV7|1|2A|G|430
8EV7|1|2A|U|431
8EV7|1|2A|A|432
8EV7|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34