J6_8FC3_003

3D structure

PDB id

8FC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

8FC3|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FC3|1|2A|G|44
8FC3|1|2A|C|45
*
8FC3|1|2A|G|179
8FC3|1|2A|G|180
8FC3|1|2A|A|181
8FC3|1|2A|A|182
8FC3|1|2A|C|183
*
8FC3|1|2A|G|214
8FC3|1|2A|G|215
8FC3|1|2A|A|216
8FC3|1|2A|G|217
8FC3|1|2A|A|218
8FC3|1|2A|G|219
8FC3|1|2A|G|220
8FC3|1|2A|A|221
8FC3|1|2A|A|222
8FC3|1|2A|A|223
8FC3|1|2A|G|224
*
8FC3|1|2A|C|231
8FC3|1|2A|G|232
8FC3|1|2A|A|233
8FC3|1|2A|C|234
8FC3|1|2A|U|235
*
8FC3|1|2A|A|262
8FC3|1|2A|C|263
8FC3|1|2A|C|264
8FC3|1|2A|A|265
8FC3|1|2A|G|266
*
8FC3|1|2A|C|426
8FC3|1|2A|U|427
8FC3|1|2A|A|428
8FC3|1|2A|A|429
8FC3|1|2A|G|430
8FC3|1|2A|U|431
8FC3|1|2A|A|432
8FC3|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34