J6_8FIZ_001

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8FIZ|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|BA|G|45
8FIZ|1|BA|G|46
*
8FIZ|1|BA|C|179
8FIZ|1|BA|G|180
8FIZ|1|BA|A|181
8FIZ|1|BA|A|182
8FIZ|1|BA|C|183
*
8FIZ|1|BA|G|214
8FIZ|1|BA|G|215
8FIZ|1|BA|A|216
8FIZ|1|BA|A|217
8FIZ|1|BA|A|218
8FIZ|1|BA|A|219
8FIZ|1|BA|G|220
8FIZ|1|BA|A|221
8FIZ|1|BA|A|222
8FIZ|1|BA|A|223
8FIZ|1|BA|U|224
*
8FIZ|1|BA|A|231
8FIZ|1|BA|G|232
8FIZ|1|BA|A|233
8FIZ|1|BA|U|234
8FIZ|1|BA|U|235
*
8FIZ|1|BA|A|262
8FIZ|1|BA|G|263
8FIZ|1|BA|C|264
8FIZ|1|BA|A|265
8FIZ|1|BA|G|266
*
8FIZ|1|BA|C|426
8FIZ|1|BA|U|427
8FIZ|1|BA|A|428
8FIZ|1|BA|A|429
8FIZ|1|BA|A|430
8FIZ|1|BA|U|431
8FIZ|1|BA|A|432
8FIZ|1|BA|C|433

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BN

50S ribosomal protein L34