J6_8FKZ_002

3D structure

PDB id

8FKZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG

Length

27 nucleotides

Bulged bases

8FKZ|1|L3|C|1501

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKZ|1|L3|C|1352
8FKZ|1|L3|G|1353
8FKZ|1|L3|A|1354
8FKZ|1|L3|G|1355
*
8FKZ|1|L3|C|1384
8FKZ|1|L3|G|1385
8FKZ|1|L3|C|1386
8FKZ|1|L3|A|1387
8FKZ|1|L3|A|1388
*
8FKZ|1|L3|U|1395
8FKZ|1|L3|G|1396
8FKZ|1|L3|A|1397
8FKZ|1|L3|A|1398
8FKZ|1|L3|G|1399
*
8FKZ|1|L3|C|1418
8FKZ|1|L3|G|1419
8FKZ|1|L3|A|1420
8FKZ|1|L3|G|1421
*
8FKZ|1|L3|C|1464
8FKZ|1|L3|G|1465
8FKZ|1|L3|G|1466
*
8FKZ|1|L3|C|1499
8FKZ|1|L3|A|1500
8FKZ|1|L3|C|1501
8FKZ|1|L3|G|1502
8FKZ|1|L3|A|1503
8FKZ|1|L3|G|1504

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain LB

60S ribosomal protein L18

Chain LK

60S ribosomal protein L27a

Chain LU

60S ribosomal protein L36

Chain SA

60S ribosomal protein L4