3D structure

PDB id
8FLC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State K3)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.76 Å

Loop

Sequence
CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
Length
27 nucleotides
Bulged bases
8FLC|1|L3|C|1501, 8FLC|1|L3|G|1502
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FLC|1|L3|C|1352
8FLC|1|L3|G|1353
8FLC|1|L3|A|1354
8FLC|1|L3|G|1355
*
8FLC|1|L3|C|1384
8FLC|1|L3|G|1385
8FLC|1|L3|C|1386
8FLC|1|L3|A|1387
8FLC|1|L3|A|1388
*
8FLC|1|L3|U|1395
8FLC|1|L3|G|1396
8FLC|1|L3|A|1397
8FLC|1|L3|A|1398
8FLC|1|L3|G|1399
*
8FLC|1|L3|C|1418
8FLC|1|L3|G|1419
8FLC|1|L3|A|1420
8FLC|1|L3|G|1421
*
8FLC|1|L3|C|1464
8FLC|1|L3|G|1465
8FLC|1|L3|G|1466
*
8FLC|1|L3|C|1499
8FLC|1|L3|A|1500
8FLC|1|L3|C|1501
8FLC|1|L3|G|1502
8FLC|1|L3|A|1503
8FLC|1|L3|G|1504

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L6
60S ribosomal protein L13
Chain LB
60S ribosomal protein L18
Chain LK
60S ribosomal protein L27a
Chain LM
60S ribosomal protein L29
Chain LU
60S ribosomal protein L36
Chain SA
60S ribosomal protein L4

Coloring options:

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