J6_8FOM_001
3D structure
- PDB id
- 8FOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.58 Å
Loop
- Sequence
- GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
- Length
- 36 nucleotides
- Bulged bases
- 8FOM|1|RA|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FOM|1|RA|G|45
8FOM|1|RA|C|46
*
8FOM|1|RA|G|179
8FOM|1|RA|G|180
8FOM|1|RA|A|181
8FOM|1|RA|A|182
8FOM|1|RA|C|183
*
8FOM|1|RA|G|214
8FOM|1|RA|G|215
8FOM|1|RA|A|216
8FOM|1|RA|G|217
8FOM|1|RA|A|218
8FOM|1|RA|G|219
8FOM|1|RA|G|220
8FOM|1|RA|A|221
8FOM|1|RA|A|222
8FOM|1|RA|A|223
8FOM|1|RA|G|224
*
8FOM|1|RA|C|231
8FOM|1|RA|G|232
8FOM|1|RA|A|233
8FOM|1|RA|C|234
8FOM|1|RA|U|235
*
8FOM|1|RA|A|262
8FOM|1|RA|C|263
8FOM|1|RA|C|264
8FOM|1|RA|A|265
8FOM|1|RA|G|266
*
8FOM|1|RA|C|426
8FOM|1|RA|U|427
8FOM|1|RA|A|428
8FOM|1|RA|A|429
8FOM|1|RA|G|430
8FOM|1|RA|U|431
8FOM|1|RA|A|432
8FOM|1|RA|C|433
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R7
- 50S ribosomal protein L34
Coloring options: