J6_8FZH_001

3D structure

PDB id

8FZH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8FZH|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZH|1|A|G|45
8FZH|1|A|G|46
*
8FZH|1|A|C|179
8FZH|1|A|G|180
8FZH|1|A|A|181
8FZH|1|A|A|182
8FZH|1|A|C|183
*
8FZH|1|A|G|214
8FZH|1|A|G|215
8FZH|1|A|A|216
8FZH|1|A|A|217
8FZH|1|A|A|218
8FZH|1|A|A|219
8FZH|1|A|G|220
8FZH|1|A|A|221
8FZH|1|A|A|222
8FZH|1|A|A|223
8FZH|1|A|U|224
*
8FZH|1|A|A|231
8FZH|1|A|G|232
8FZH|1|A|A|233
8FZH|1|A|U|234
8FZH|1|A|U|235
*
8FZH|1|A|A|262
8FZH|1|A|G|263
8FZH|1|A|C|264
8FZH|1|A|A|265
8FZH|1|A|G|266
*
8FZH|1|A|C|426
8FZH|1|A|U|427
8FZH|1|A|A|428
8FZH|1|A|A|429
8FZH|1|A|A|430
8FZH|1|A|U|431
8FZH|1|A|A|432
8FZH|1|A|C|433

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L34