J6_8FZI_001

3D structure

PDB id

8FZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8FZI|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZI|1|A|G|45
8FZI|1|A|G|46
*
8FZI|1|A|C|179
8FZI|1|A|G|180
8FZI|1|A|A|181
8FZI|1|A|A|182
8FZI|1|A|C|183
*
8FZI|1|A|G|214
8FZI|1|A|G|215
8FZI|1|A|A|216
8FZI|1|A|A|217
8FZI|1|A|A|218
8FZI|1|A|A|219
8FZI|1|A|G|220
8FZI|1|A|A|221
8FZI|1|A|A|222
8FZI|1|A|A|223
8FZI|1|A|U|224
*
8FZI|1|A|A|231
8FZI|1|A|G|232
8FZI|1|A|A|233
8FZI|1|A|U|234
8FZI|1|A|U|235
*
8FZI|1|A|A|262
8FZI|1|A|G|263
8FZI|1|A|C|264
8FZI|1|A|A|265
8FZI|1|A|G|266
*
8FZI|1|A|C|426
8FZI|1|A|U|427
8FZI|1|A|A|428
8FZI|1|A|A|429
8FZI|1|A|A|430
8FZI|1|A|U|431
8FZI|1|A|A|432
8FZI|1|A|C|433

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L34