J6_8G34_001

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8G34|1|B|A|223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G34|1|B|G|45
8G34|1|B|G|46
*
8G34|1|B|C|179
8G34|1|B|G|180
8G34|1|B|A|181
8G34|1|B|A|182
8G34|1|B|C|183
*
8G34|1|B|G|214
8G34|1|B|G|215
8G34|1|B|A|216
8G34|1|B|A|217
8G34|1|B|A|218
8G34|1|B|A|219
8G34|1|B|G|220
8G34|1|B|A|221
8G34|1|B|A|222
8G34|1|B|A|223
8G34|1|B|U|224
*
8G34|1|B|A|231
8G34|1|B|G|232
8G34|1|B|A|233
8G34|1|B|U|234
8G34|1|B|U|235
*
8G34|1|B|A|262
8G34|1|B|G|263
8G34|1|B|C|264
8G34|1|B|A|265
8G34|1|B|G|266
*
8G34|1|B|C|426
8G34|1|B|U|427
8G34|1|B|A|428
8G34|1|B|A|429
8G34|1|B|A|430
8G34|1|B|U|431
8G34|1|B|A|432
8G34|1|B|C|433

Current chains

Chain B

23S

Nearby chains

Chain 2

50S ribosomal protein L34