J6_8G38_001

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8G38|1|B|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G38|1|B|G|45
8G38|1|B|G|46
*
8G38|1|B|C|179
8G38|1|B|G|180
8G38|1|B|A|181
8G38|1|B|A|182
8G38|1|B|C|183
*
8G38|1|B|G|214
8G38|1|B|G|215
8G38|1|B|A|216
8G38|1|B|A|217
8G38|1|B|A|218
8G38|1|B|A|219
8G38|1|B|G|220
8G38|1|B|A|221
8G38|1|B|A|222
8G38|1|B|A|223
8G38|1|B|U|224
*
8G38|1|B|A|231
8G38|1|B|G|232
8G38|1|B|A|233
8G38|1|B|U|234
8G38|1|B|U|235
*
8G38|1|B|A|262
8G38|1|B|G|263
8G38|1|B|C|264
8G38|1|B|A|265
8G38|1|B|G|266
*
8G38|1|B|C|426
8G38|1|B|U|427
8G38|1|B|A|428
8G38|1|B|A|429
8G38|1|B|A|430
8G38|1|B|U|431
8G38|1|B|A|432
8G38|1|B|C|433

Current chains

Chain B

23S

Nearby chains

Chain 2

50S ribosomal protein L34