J6_8G60_002

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG

Length

27 nucleotides

Bulged bases

8G60|1|L5|C|1501, 8G60|1|L5|G|1502

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|C|1352
8G60|1|L5|G|1353
8G60|1|L5|A|1354
8G60|1|L5|G|1355
*
8G60|1|L5|C|1384
8G60|1|L5|G|1385
8G60|1|L5|C|1386
8G60|1|L5|A|1387
8G60|1|L5|A|1388
*
8G60|1|L5|U|1395
8G60|1|L5|G|1396
8G60|1|L5|A|1397
8G60|1|L5|A|1398
8G60|1|L5|G|1399
*
8G60|1|L5|C|1418
8G60|1|L5|G|1419
8G60|1|L5|A|1420
8G60|1|L5|G|1421
*
8G60|1|L5|C|1464
8G60|1|L5|G|1465
8G60|1|L5|G|1466
*
8G60|1|L5|C|1499
8G60|1|L5|A|1500
8G60|1|L5|C|1501
8G60|1|L5|G|1502
8G60|1|L5|A|1503
8G60|1|L5|G|1504

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

uL4

Chain LL

eL13

Chain LQ

eL18

Chain La

uL15

Chain Lb

eL29

Chain Li

eL36