J6_8G6W_001

3D structure

PDB id

8G6W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8G6W|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6W|1|a|G|45
8G6W|1|a|G|46
*
8G6W|1|a|C|179
8G6W|1|a|G|180
8G6W|1|a|A|181
8G6W|1|a|A|182
8G6W|1|a|C|183
*
8G6W|1|a|G|214
8G6W|1|a|G|215
8G6W|1|a|A|216
8G6W|1|a|A|217
8G6W|1|a|A|218
8G6W|1|a|A|219
8G6W|1|a|G|220
8G6W|1|a|A|221
8G6W|1|a|A|222
8G6W|1|a|A|223
8G6W|1|a|U|224
*
8G6W|1|a|A|231
8G6W|1|a|G|232
8G6W|1|a|A|233
8G6W|1|a|U|234
8G6W|1|a|U|235
*
8G6W|1|a|A|262
8G6W|1|a|G|263
8G6W|1|a|C|264
8G6W|1|a|A|265
8G6W|1|a|G|266
*
8G6W|1|a|C|426
8G6W|1|a|U|427
8G6W|1|a|A|428
8G6W|1|a|A|429
8G6W|1|a|A|430
8G6W|1|a|U|431
8G6W|1|a|A|432
8G6W|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34