J6_8G6X_001

3D structure

PDB id

8G6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.31 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8G6X|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6X|1|a|G|45
8G6X|1|a|G|46
*
8G6X|1|a|C|179
8G6X|1|a|G|180
8G6X|1|a|A|181
8G6X|1|a|A|182
8G6X|1|a|C|183
*
8G6X|1|a|G|214
8G6X|1|a|G|215
8G6X|1|a|A|216
8G6X|1|a|A|217
8G6X|1|a|A|218
8G6X|1|a|A|219
8G6X|1|a|G|220
8G6X|1|a|A|221
8G6X|1|a|A|222
8G6X|1|a|A|223
8G6X|1|a|U|224
*
8G6X|1|a|A|231
8G6X|1|a|G|232
8G6X|1|a|A|233
8G6X|1|a|U|234
8G6X|1|a|U|235
*
8G6X|1|a|A|262
8G6X|1|a|G|263
8G6X|1|a|C|264
8G6X|1|a|A|265
8G6X|1|a|G|266
*
8G6X|1|a|C|426
8G6X|1|a|U|427
8G6X|1|a|A|428
8G6X|1|a|A|429
8G6X|1|a|A|430
8G6X|1|a|U|431
8G6X|1|a|A|432
8G6X|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34