J6_8G7Q_001

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8G7Q|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G7Q|1|A|G|45
8G7Q|1|A|G|46
*
8G7Q|1|A|C|179
8G7Q|1|A|G|180
8G7Q|1|A|A|181
8G7Q|1|A|A|182
8G7Q|1|A|C|183
*
8G7Q|1|A|G|214
8G7Q|1|A|G|215
8G7Q|1|A|A|216
8G7Q|1|A|A|217
8G7Q|1|A|A|218
8G7Q|1|A|A|219
8G7Q|1|A|G|220
8G7Q|1|A|A|221
8G7Q|1|A|A|222
8G7Q|1|A|A|223
8G7Q|1|A|U|224
*
8G7Q|1|A|A|231
8G7Q|1|A|G|232
8G7Q|1|A|A|233
8G7Q|1|A|U|234
8G7Q|1|A|U|235
*
8G7Q|1|A|A|262
8G7Q|1|A|G|263
8G7Q|1|A|C|264
8G7Q|1|A|A|265
8G7Q|1|A|G|266
*
8G7Q|1|A|C|426
8G7Q|1|A|U|427
8G7Q|1|A|A|428
8G7Q|1|A|A|429
8G7Q|1|A|A|430
8G7Q|1|A|U|431
8G7Q|1|A|A|432
8G7Q|1|A|C|433

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L34