J6_8OIQ_001
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAGAAAG*CAACC*GAGAUAGU*AAACG*CUUGAC*GCCCAAUACC
- Length
- 41 nucleotides
- Bulged bases
- 8OIQ|1|B8|A|368, 8OIQ|1|B8|A|432, 8OIQ|1|B8|C|460, 8OIQ|1|B8|G|473, 8OIQ|1|B8|C|593
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIQ|1|B8|G|363
8OIQ|1|B8|A|364
8OIQ|1|B8|G|365
8OIQ|1|B8|A|366
8OIQ|1|B8|A|367
8OIQ|1|B8|A|368
8OIQ|1|B8|G|369
*
8OIQ|1|B8|C|380
8OIQ|1|B8|A|381
8OIQ|1|B8|A|382
8OIQ|1|B8|C|383
8OIQ|1|B8|C|384
*
8OIQ|1|B8|G|427
8OIQ|1|B8|A|428
8OIQ|1|B8|G|429
8OIQ|1|B8|A|430
8OIQ|1|B8|U|431
8OIQ|1|B8|A|432
8OIQ|1|B8|G|433
8OIQ|1|B8|U|434
*
8OIQ|1|B8|A|457
8OIQ|1|B8|A|458
8OIQ|1|B8|A|459
8OIQ|1|B8|C|460
8OIQ|1|B8|G|461
*
8OIQ|1|B8|C|470
8OIQ|1|B8|U|471
8OIQ|1|B8|U|472
8OIQ|1|B8|G|473
8OIQ|1|B8|A|474
8OIQ|1|B8|C|475
*
8OIQ|1|B8|G|592
8OIQ|1|B8|C|593
8OIQ|1|B8|C|594
8OIQ|1|B8|C|595
8OIQ|1|B8|A|596
8OIQ|1|B8|A|597
8OIQ|1|B8|U|598
8OIQ|1|B8|A|599
8OIQ|1|B8|C|600
8OIQ|1|B8|C|601
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BG
- uL30m
- Chain BK
- 39S ribosomal protein L35, mitochondrial
- Chain BP
- Mitochondrial ribosomal protein L10
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain BU
- uL16m
- Chain BY
- Mitochondrial ribosomal protein L20
- Chain BZ
- Mitochondrial ribosomal protein L21
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Be
- Mitochondrial ribosomal protein L57
- Chain Bz
- Mitochondrial ribosomal protein L51
Coloring options: