J6_8PHJ_001

3D structure

PDB id

8PHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

cA4-bound Cami1 in complex with 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8PHJ|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PHJ|1|a|G|45
8PHJ|1|a|G|46
*
8PHJ|1|a|C|179
8PHJ|1|a|G|180
8PHJ|1|a|A|181
8PHJ|1|a|A|182
8PHJ|1|a|C|183
*
8PHJ|1|a|G|214
8PHJ|1|a|G|215
8PHJ|1|a|A|216
8PHJ|1|a|A|217
8PHJ|1|a|A|218
8PHJ|1|a|A|219
8PHJ|1|a|G|220
8PHJ|1|a|A|221
8PHJ|1|a|A|222
8PHJ|1|a|A|223
8PHJ|1|a|U|224
*
8PHJ|1|a|A|231
8PHJ|1|a|G|232
8PHJ|1|a|A|233
8PHJ|1|a|U|234
8PHJ|1|a|U|235
*
8PHJ|1|a|A|262
8PHJ|1|a|G|263
8PHJ|1|a|C|264
8PHJ|1|a|A|265
8PHJ|1|a|G|266
*
8PHJ|1|a|C|426
8PHJ|1|a|U|427
8PHJ|1|a|A|428
8PHJ|1|a|A|429
8PHJ|1|a|A|430
8PHJ|1|a|U|431
8PHJ|1|a|A|432
8PHJ|1|a|C|433

Current chains

Chain a

23S rRNA (2862-MER)

Nearby chains

Chain 1

Large ribosomal subunit protein bL34