J6_8UU4_001
3D structure
- PDB id
- 8UU4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GC*GCAGAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC
- Length
- 37 nucleotides
- Bulged bases
- 8UU4|1|A|G|183, 8UU4|1|A|A|225
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UU4|1|A|G|45
8UU4|1|A|C|46
*
8UU4|1|A|G|180
8UU4|1|A|C|181
8UU4|1|A|A|182
8UU4|1|A|G|183
8UU4|1|A|A|184
8UU4|1|A|C|185
*
8UU4|1|A|G|216
8UU4|1|A|G|217
8UU4|1|A|A|218
8UU4|1|A|A|219
8UU4|1|A|G|220
8UU4|1|A|A|221
8UU4|1|A|G|222
8UU4|1|A|A|223
8UU4|1|A|A|224
8UU4|1|A|A|225
8UU4|1|A|G|226
*
8UU4|1|A|C|233
8UU4|1|A|G|234
8UU4|1|A|A|235
8UU4|1|A|U|236
8UU4|1|A|U|237
*
8UU4|1|A|A|264
8UU4|1|A|A|265
8UU4|1|A|G|266
8UU4|1|A|A|267
8UU4|1|A|G|268
*
8UU4|1|A|C|472
8UU4|1|A|U|473
8UU4|1|A|A|474
8UU4|1|A|A|475
8UU4|1|A|A|476
8UU4|1|A|U|477
8UU4|1|A|A|478
8UU4|1|A|C|479
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- Large ribosomal subunit protein bL34
- Chain E
- Large ribosomal subunit protein uL4
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