3D structure

PDB id
8V03 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
8V03|1|1|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8V03|1|1|G|45
8V03|1|1|G|46
*
8V03|1|1|C|179
8V03|1|1|G|180
8V03|1|1|A|181
8V03|1|1|A|182
8V03|1|1|C|183
*
8V03|1|1|G|214
8V03|1|1|G|215
8V03|1|1|A|216
8V03|1|1|A|217
8V03|1|1|A|218
8V03|1|1|A|219
8V03|1|1|G|220
8V03|1|1|A|221
8V03|1|1|A|222
8V03|1|1|A|223
8V03|1|1|U|224
*
8V03|1|1|A|231
8V03|1|1|G|232
8V03|1|1|A|233
8V03|1|1|U|234
8V03|1|1|U|235
*
8V03|1|1|A|262
8V03|1|1|G|263
8V03|1|1|C|264
8V03|1|1|A|265
8V03|1|1|G|266
*
8V03|1|1|C|426
8V03|1|1|U|427
8V03|1|1|A|428
8V03|1|1|A|429
8V03|1|1|A|430
8V03|1|1|U|431
8V03|1|1|A|432
8V03|1|1|C|433

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain d
50S ribosomal protein L34

Coloring options:

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