J6_8VVR_001
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCGAC*GGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 8VVR|1|WA|A|66, 8VVR|1|YA|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVR|1|WA|G|21
8VVR|1|WA|G|22
8VVR|1|WA|C|23
8VVR|1|WA|G|24
8VVR|1|WA|A|25
8VVR|1|WA|C|26
*
8VVR|1|WA|G|57
8VVR|1|WA|G|58
8VVR|1|WA|A|59
8VVR|1|WA|A|60
8VVR|1|WA|A|61
8VVR|1|WA|A|62
8VVR|1|WA|G|63
8VVR|1|WA|A|64
8VVR|1|WA|A|65
8VVR|1|WA|A|66
8VVR|1|WA|C|67
*
8VVR|1|WA|G|74
8VVR|1|WA|G|75
8VVR|1|WA|A|76
8VVR|1|WA|U|77
8VVR|1|WA|U|78
*
8VVR|1|WA|A|105
8VVR|1|WA|A|106
8VVR|1|WA|G|107
8VVR|1|WA|A|108
8VVR|1|WA|G|109
*
8VVR|1|WA|C|332
8VVR|1|WA|U|333
8VVR|1|WA|A|334
8VVR|1|WA|A|335
8VVR|1|WA|A|336
8VVR|1|WA|U|337
8VVR|1|WA|A|338
8VVR|1|WA|C|339
*
8VVR|1|YA|G|33
8VVR|1|YA|U|34
8VVR|1|YA|C|35
Current chains
- Chain WA
- 28S rRNA
- Chain YA
- 5.8S rRNA
Nearby chains
- Chain GA
- L35
- Chain HA
- L36
- Chain IA
- L37
- Chain K
- eL13
- Chain M
- eL15
Coloring options: