J6_8W51_001

3D structure

PDB id

8W51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of YchF(H114A) on E.coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8W51|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8W51|1|A|G|45
8W51|1|A|G|46
*
8W51|1|A|C|179
8W51|1|A|G|180
8W51|1|A|A|181
8W51|1|A|A|182
8W51|1|A|C|183
*
8W51|1|A|G|214
8W51|1|A|G|215
8W51|1|A|A|216
8W51|1|A|A|217
8W51|1|A|A|218
8W51|1|A|A|219
8W51|1|A|G|220
8W51|1|A|A|221
8W51|1|A|A|222
8W51|1|A|A|223
8W51|1|A|U|224
*
8W51|1|A|A|231
8W51|1|A|G|232
8W51|1|A|A|233
8W51|1|A|U|234
8W51|1|A|U|235
*
8W51|1|A|A|262
8W51|1|A|G|263
8W51|1|A|C|264
8W51|1|A|A|265
8W51|1|A|G|266
*
8W51|1|A|C|426
8W51|1|A|U|427
8W51|1|A|A|428
8W51|1|A|A|429
8W51|1|A|A|430
8W51|1|A|U|431
8W51|1|A|A|432
8W51|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L34