J6_8WI7_001

3D structure

PDB id

8WI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GC*GGAAC*GGAAGAGAAAA*UGAUU*AGGAUG*CUGAAUAC

Length

37 nucleotides

Bulged bases

8WI7|1|A|A|222, 8WI7|1|A|U|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WI7|1|A|G|42
8WI7|1|A|C|43
*
8WI7|1|A|G|178
8WI7|1|A|G|179
8WI7|1|A|A|180
8WI7|1|A|A|181
8WI7|1|A|C|182
*
8WI7|1|A|G|213
8WI7|1|A|G|214
8WI7|1|A|A|215
8WI7|1|A|A|216
8WI7|1|A|G|217
8WI7|1|A|A|218
8WI7|1|A|G|219
8WI7|1|A|A|220
8WI7|1|A|A|221
8WI7|1|A|A|222
8WI7|1|A|A|223
*
8WI7|1|A|U|231
8WI7|1|A|G|232
8WI7|1|A|A|233
8WI7|1|A|U|234
8WI7|1|A|U|235
*
8WI7|1|A|A|262
8WI7|1|A|G|263
8WI7|1|A|G|264
8WI7|1|A|A|265
8WI7|1|A|U|266
8WI7|1|A|G|267
*
8WI7|1|A|C|514
8WI7|1|A|U|515
8WI7|1|A|G|516
8WI7|1|A|A|517
8WI7|1|A|A|518
8WI7|1|A|U|519
8WI7|1|A|A|520
8WI7|1|A|C|521

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34